NephVar / Molecular Grammars / SIX2

SIX2 SIX2

CAKUT panel · 291 aa · UniProt Q9NPC8 · 1 IDR · View biophysical profile →
IDR map — colored by GIN molecular grammar cluster
IDR 1 Cluster 13
Residues 145–291 · 146 aa (50.2% of protein) · Min inter-cluster distance: 11.598
Blocks of negative, P, & polar residues
Note: this region spans the majority of the protein sequence, which may indicate a structured domain (e.g. a collagen triple helix or repetitive fibrous domain) that AlphaFold2 monomer predictions and sequence-based disorder predictors can misclassify as disordered. Interpret this grammar assignment with caution.
NPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAAEAKERENNENSNSNSHNPLNGSGKSVLGSSEDEKTPSGTPDHSSSSPALLLSPPPPGLPSLHSLGHPPGPSAVPVPVPGGGGADPLQHHHGLQDSILNPMSANLVDLGS
N Patch: +8.42neg-pro: +3.75pol-pol: +3.28pol-pro: +2.91pol-neg: +2.49hyd-neg: +2.01Frac N: +1.65pro-pro: +1.59
Show all 90 sequence-feature z-scores
FeatureZ-score
pol-pol+3.279
pol-hyd+1.238
pol-pos+0.000
pol-neg+2.492
pol-aro+0.000
pol-ala+0.000
pol-pro+2.913
pol-gly+0.000
hyd-hyd+1.298
hyd-pos+0.000
hyd-neg+2.011
hyd-aro+0.000
hyd-ala+0.000
hyd-pro+0.552
hyd-gly+0.000
pos-pos+0.000
pos-neg+0.000
pos-aro+0.000
pos-ala+0.000
pos-pro+0.000
pos-gly+0.000
neg-neg+1.458
neg-aro+0.000
neg-ala+0.000
neg-pro+3.751
neg-gly+0.000
aro-aro+0.000
aro-ala+0.000
aro-pro+0.000
aro-gly+0.000
ala-ala+0.000
ala-pro+0.000
ala-gly+0.000
pro-pro+1.589
pro-gly+0.000
gly-gly+0.000
Frac A-0.289
Frac C-0.582
Frac D-0.245
Frac E-0.427
Frac F-0.420
Frac G+0.203
Frac H+0.905
Frac I-0.555
Frac K-0.475
Frac L+1.262
Frac M-0.479
Frac N+1.647
Frac P+0.339
Frac Q-0.601
Frac R-0.354
Frac S+0.282
Frac T-0.362
Frac V+0.191
Frac W+0.115
Frac Y-0.203
Frac K+R-0.590
Frac D+E-0.445
Frac Polar+0.548
Frac Aliphatic+0.215
Frac Aromatic-0.357
R/K Ratio+0.170
E/D Ratio-0.090
Frac Chain Expanding-0.600
FCR-0.721
NCPR-0.052
Hydrophobicity+0.358
Disorder Promoting-1.117
Iso point-0.271
PPII-0.253
A Patch-0.265
C Patch-0.009
D Patch-0.178
E Patch+0.543
F Patch-0.012
G Patch+0.044
H Patch-0.077
I Patch-0.011
K Patch-0.253
L Patch-0.096
M Patch-0.026
N Patch+8.421
P Patch+0.084
Q Patch-0.160
R Patch+0.714
S Patch-0.172
T Patch+1.096
V Patch-0.051
Y Patch-0.022
RG Frac-0.130